
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 1:48.060m | 1:48.060m | |
| 2 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 1:48.297m | +0.237s | |
| 4 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 1:48.437m | +0.377s | |
| 5 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 1:48.599m | +0.539s | |
| 6 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 1:48.618m | +0.558s | |
| 7 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 1:48.713m | +0.653s | |
| 8 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 1:48.764m | +0.704s | |
| 9 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 1:48.876m | +0.816s | |
| 10 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 1:49.013m | +0.953s | |
| 11 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 1:49.314m | +1.254s | |
| 12 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 1:49.348m | +1.288s | |
| 13 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 1:49.368m | +1.308s | |
| 14 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 1:49.400m | +1.340s | |
| 15 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 1:49.422m | +1.362s | |
| 16 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 1:49.425m | +1.365s | |
| 17 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:49.433m | +1.373s | |
| 18 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 1:49.437m | +1.377s | |
| 19 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 1:49.485m | +1.425s | |
| 20 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 1:49.495m | +1.435s | |
| 21 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:49.528m | +1.468s | |
| 22 | L. Loi | Livio Loi | Marc VDS Racing | Marc VDS Racing Team | 1:49.555m | +1.495s | |
| 23 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 1:49.698m | +1.638s | |
| 24 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 1:49.789m | +1.729s | |
| 25 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 1:50.052m | +1.992s | |
| 26 | A. Tonucci | Alessandro Tonucci | LF Tascaracing | La Fonte Tascaracing | 1:50.405m | +2.345s | |
| 27 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 1:50.577m | +2.517s | |
| 28 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 1:50.597m | +2.537s | |
| 29 | F. Alt | Florian Alt | Kiefer Racing | Kiefer Racing | 1:50.672m | +2.612s | |
| 30 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 1:51.208m | +3.148s | |
| 31 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | 1:51.357m | +3.297s | |
| 32 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 1:51.602m | +3.542s | |
| 33 | J. Danilo | Jules Danilo | Ambrogio Racing | Ambrogio Racing | 1:52.806m | +4.746s |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |