
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 1:59.801m | 1:59.801m | |
| 2 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 1:59.961m | +0.160s | |
| 3 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 2:00.229m | +0.428s | |
| 4 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 2:00.477m | +0.676s | |
| 5 | Z. Khairuddin | Zulfahmi Khairuddin | RB KTM Ajo | Red Bull KTM Ajo | 2:00.924m | +1.123s | |
| 6 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 2:00.971m | +1.170s | |
| 7 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 2:00.981m | +1.180s | |
| 8 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 2:01.079m | +1.278s | |
| 9 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 2:01.222m | +1.421s | |
| 10 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 2:01.302m | +1.501s | |
| 11 | B. Schouten | Bryan Schouten | Dutch Racing | Dutch Racing Team | 2:01.360m | +1.559s | |
| 12 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 2:01.456m | +1.655s | |
| 13 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 2:01.489m | +1.688s | |
| 14 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 2:01.552m | +1.751s | |
| 15 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 2:01.564m | +1.763s | |
| 16 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 2:01.611m | +1.810s | |
| 17 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 2:01.655m | +1.854s | |
| 18 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 2:01.658m | +1.857s | |
| 19 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | 2:01.781m | +1.980s | |
| 20 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 2:01.831m | +2.030s | |
| 21 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 2:02.000m | +2.199s | |
| 22 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 2:02.023m | +2.222s | |
| 23 | Ambrogio Racing | Ambrogio Racing | 2:02.119m | +2.318s | |||
| 24 | L. Loi | Livio Loi | Marc VDS Racing | Marc VDS Racing Team | 2:02.122m | +2.321s | |
| 25 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 2:02.150m | +2.349s | |
| 26 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 2:02.292m | +2.491s | |
| 27 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 2:02.293m | +2.492s | |
| 28 | M. Herrera | Maria Herrera | Jun. Estrella | Junior Team Estrella Galicia | 2:02.454m | +2.653s | |
| 29 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 2:02.590m | +2.789s | |
| 30 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 2:02.601m | +2.800s | |
| 31 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 2:02.735m | +2.934s | |
| 32 | A. Tonucci | Alessandro Tonucci | LF Tascaracing | La Fonte Tascaracing | 2:02.790m | +2.989s | |
| 33 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 2:02.949m | +3.148s | |
| 34 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 2:03.434m | +3.633s | |
| 35 | F. Alt | Florian Alt | Kiefer Racing | Kiefer Racing | 2:03.768m | +3.967s |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |